use live paper api for cron selection
Browse files- daily_papers_sync.py +59 -33
daily_papers_sync.py
CHANGED
|
@@ -5,8 +5,6 @@
|
|
| 5 |
# "datasets",
|
| 6 |
# "requests",
|
| 7 |
# "huggingface-hub",
|
| 8 |
-
# "pandas",
|
| 9 |
-
# "pyarrow",
|
| 10 |
# ]
|
| 11 |
# ///
|
| 12 |
"""
|
|
@@ -28,14 +26,10 @@ from datetime import datetime, timezone
|
|
| 28 |
from typing import Any, Optional
|
| 29 |
from urllib.parse import urlparse
|
| 30 |
|
| 31 |
-
import pandas as pd
|
| 32 |
import requests
|
| 33 |
from datasets import load_dataset
|
| 34 |
-
from huggingface_hub import hf_hub_download
|
| 35 |
|
| 36 |
REPO_ID = "huggingface/trending-papers-x"
|
| 37 |
-
INDEXED_PAPERS_REPO_ID = "cfahlgren1/hub-stats"
|
| 38 |
-
INDEXED_PAPERS_FILENAME = "arxiv_papers.parquet"
|
| 39 |
API_BASE = "https://huggingface.co/api"
|
| 40 |
DEFAULT_LIMIT = 150
|
| 41 |
DEFAULT_SLEEP_AFTER_INDEX_SECONDS = 30
|
|
@@ -56,6 +50,13 @@ class Candidate:
|
|
| 56 |
source: Optional[str]
|
| 57 |
|
| 58 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 59 |
def normalize_arxiv_id(value: Any) -> Optional[str]:
|
| 60 |
"""Extract and validate arXiv ID from various formats."""
|
| 61 |
if not value:
|
|
@@ -179,26 +180,29 @@ def get_token() -> str:
|
|
| 179 |
return ""
|
| 180 |
|
| 181 |
|
| 182 |
-
def
|
| 183 |
-
|
| 184 |
-
|
| 185 |
-
|
| 186 |
-
|
| 187 |
-
|
| 188 |
-
|
| 189 |
-
|
| 190 |
-
indexed = pd.read_parquet(parquet_path, columns=["id"])
|
| 191 |
-
return {
|
| 192 |
-
arxiv_id
|
| 193 |
-
for value in indexed["id"].dropna()
|
| 194 |
-
if (arxiv_id := normalize_arxiv_id(value))
|
| 195 |
-
}
|
| 196 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 197 |
|
| 198 |
-
|
| 199 |
-
|
|
|
|
|
|
|
|
|
|
| 200 |
dataset = load_dataset(REPO_ID, split="train", streaming=True)
|
| 201 |
candidates: list[Candidate] = []
|
|
|
|
| 202 |
seen: set[str] = set()
|
| 203 |
|
| 204 |
for row in dataset:
|
|
@@ -206,7 +210,7 @@ def iter_candidates(indexed_paper_ids: set[str], limit: int) -> list[Candidate]:
|
|
| 206 |
break
|
| 207 |
|
| 208 |
arxiv_id = normalize_arxiv_id(row.get("arxiv_id") or row.get("paper_id"))
|
| 209 |
-
if not arxiv_id or arxiv_id in
|
| 210 |
continue
|
| 211 |
|
| 212 |
github_repo = normalize_github_repo(row.get("github") or row.get("github_url"))
|
|
@@ -217,6 +221,19 @@ def iter_candidates(indexed_paper_ids: set[str], limit: int) -> list[Candidate]:
|
|
| 217 |
continue
|
| 218 |
|
| 219 |
seen.add(arxiv_id)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 220 |
candidates.append(
|
| 221 |
Candidate(
|
| 222 |
arxiv_id=arxiv_id,
|
|
@@ -227,7 +244,7 @@ def iter_candidates(indexed_paper_ids: set[str], limit: int) -> list[Candidate]:
|
|
| 227 |
)
|
| 228 |
)
|
| 229 |
|
| 230 |
-
return candidates
|
| 231 |
|
| 232 |
|
| 233 |
def index_paper(
|
|
@@ -298,13 +315,11 @@ def main() -> None:
|
|
| 298 |
)
|
| 299 |
|
| 300 |
print(f"Dataset: {REPO_ID}")
|
| 301 |
-
print(f"
|
| 302 |
-
print(f"Limit: {args.limit} missing link-bearing papers")
|
| 303 |
print(f"Mode: {'dry-run' if args.dry_run else 'apply'}")
|
| 304 |
print("-" * 50)
|
| 305 |
|
| 306 |
-
|
| 307 |
-
candidates = iter_candidates(indexed_paper_ids, args.limit)
|
| 308 |
if candidates:
|
| 309 |
first_added_at = (
|
| 310 |
candidates[0].added_at.isoformat() if candidates[0].added_at else "unknown"
|
|
@@ -319,7 +334,14 @@ def main() -> None:
|
|
| 319 |
print("Candidates: 0")
|
| 320 |
print("-" * 50)
|
| 321 |
|
| 322 |
-
stats = {
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 323 |
|
| 324 |
for candidate in candidates:
|
| 325 |
pieces = [
|
|
@@ -349,7 +371,7 @@ def main() -> None:
|
|
| 349 |
stats["already_indexed"] += 1
|
| 350 |
print(f"ALREADY INDEXED: {' | '.join(pieces)}")
|
| 351 |
else:
|
| 352 |
-
stats["
|
| 353 |
print(
|
| 354 |
f"ERROR: {candidate.arxiv_id} - failed to index"
|
| 355 |
f" (status={index_http_status}, error={index_error})"
|
|
@@ -366,21 +388,25 @@ def main() -> None:
|
|
| 366 |
stats["links"] += 1
|
| 367 |
print(f"LINKS {links_status.upper()}: {candidate.arxiv_id}")
|
| 368 |
else:
|
| 369 |
-
stats["
|
| 370 |
print(
|
| 371 |
f"ERROR: {candidate.arxiv_id} - failed to update links"
|
| 372 |
f" (status={links_http_status}, error={links_error})"
|
| 373 |
)
|
| 374 |
|
| 375 |
print("-" * 50)
|
|
|
|
|
|
|
|
|
|
| 376 |
print(f"Candidates: {len(candidates)}")
|
| 377 |
print(f"Indexed: {stats['indexed']}")
|
| 378 |
print(f"Already indexed: {stats['already_indexed']}")
|
| 379 |
print(f"Links updated: {stats['links']}")
|
| 380 |
print(f"Dry run: {stats['dry_run']}")
|
| 381 |
-
print(f"
|
|
|
|
| 382 |
|
| 383 |
-
if stats["
|
| 384 |
exit(1)
|
| 385 |
|
| 386 |
|
|
|
|
| 5 |
# "datasets",
|
| 6 |
# "requests",
|
| 7 |
# "huggingface-hub",
|
|
|
|
|
|
|
| 8 |
# ]
|
| 9 |
# ///
|
| 10 |
"""
|
|
|
|
| 26 |
from typing import Any, Optional
|
| 27 |
from urllib.parse import urlparse
|
| 28 |
|
|
|
|
| 29 |
import requests
|
| 30 |
from datasets import load_dataset
|
|
|
|
| 31 |
|
| 32 |
REPO_ID = "huggingface/trending-papers-x"
|
|
|
|
|
|
|
| 33 |
API_BASE = "https://huggingface.co/api"
|
| 34 |
DEFAULT_LIMIT = 150
|
| 35 |
DEFAULT_SLEEP_AFTER_INDEX_SECONDS = 30
|
|
|
|
| 50 |
source: Optional[str]
|
| 51 |
|
| 52 |
|
| 53 |
+
@dataclass
|
| 54 |
+
class CandidateStats:
|
| 55 |
+
link_rows_checked: int = 0
|
| 56 |
+
already_indexed: int = 0
|
| 57 |
+
status_errors: int = 0
|
| 58 |
+
|
| 59 |
+
|
| 60 |
def normalize_arxiv_id(value: Any) -> Optional[str]:
|
| 61 |
"""Extract and validate arXiv ID from various formats."""
|
| 62 |
if not value:
|
|
|
|
| 180 |
return ""
|
| 181 |
|
| 182 |
|
| 183 |
+
def get_paper_status(
|
| 184 |
+
session: requests.Session, arxiv_id: str
|
| 185 |
+
) -> tuple[str, Optional[int], Optional[str]]:
|
| 186 |
+
"""Check whether a paper is already indexed."""
|
| 187 |
+
try:
|
| 188 |
+
r = session.get(f"{API_BASE}/papers/{arxiv_id}", timeout=30)
|
| 189 |
+
except requests.RequestException as e:
|
| 190 |
+
return "error", None, str(e)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 191 |
|
| 192 |
+
if r.status_code == 200:
|
| 193 |
+
return "indexed", r.status_code, None
|
| 194 |
+
if r.status_code == 404:
|
| 195 |
+
return "missing", r.status_code, None
|
| 196 |
+
return "error", r.status_code, r.text[:500]
|
| 197 |
|
| 198 |
+
|
| 199 |
+
def iter_candidates(
|
| 200 |
+
session: requests.Session, limit: int
|
| 201 |
+
) -> tuple[list[Candidate], CandidateStats]:
|
| 202 |
+
"""Select live-missing trending papers that have link metadata."""
|
| 203 |
dataset = load_dataset(REPO_ID, split="train", streaming=True)
|
| 204 |
candidates: list[Candidate] = []
|
| 205 |
+
stats = CandidateStats()
|
| 206 |
seen: set[str] = set()
|
| 207 |
|
| 208 |
for row in dataset:
|
|
|
|
| 210 |
break
|
| 211 |
|
| 212 |
arxiv_id = normalize_arxiv_id(row.get("arxiv_id") or row.get("paper_id"))
|
| 213 |
+
if not arxiv_id or arxiv_id in seen:
|
| 214 |
continue
|
| 215 |
|
| 216 |
github_repo = normalize_github_repo(row.get("github") or row.get("github_url"))
|
|
|
|
| 221 |
continue
|
| 222 |
|
| 223 |
seen.add(arxiv_id)
|
| 224 |
+
stats.link_rows_checked += 1
|
| 225 |
+
status, http_status, error = get_paper_status(session, arxiv_id)
|
| 226 |
+
if status == "indexed":
|
| 227 |
+
stats.already_indexed += 1
|
| 228 |
+
continue
|
| 229 |
+
if status == "error":
|
| 230 |
+
stats.status_errors += 1
|
| 231 |
+
print(
|
| 232 |
+
f"ERROR: {arxiv_id} - failed to check paper status"
|
| 233 |
+
f" (status={http_status}, error={error})"
|
| 234 |
+
)
|
| 235 |
+
continue
|
| 236 |
+
|
| 237 |
candidates.append(
|
| 238 |
Candidate(
|
| 239 |
arxiv_id=arxiv_id,
|
|
|
|
| 244 |
)
|
| 245 |
)
|
| 246 |
|
| 247 |
+
return candidates, stats
|
| 248 |
|
| 249 |
|
| 250 |
def index_paper(
|
|
|
|
| 315 |
)
|
| 316 |
|
| 317 |
print(f"Dataset: {REPO_ID}")
|
| 318 |
+
print(f"Limit: {args.limit} live-missing link-bearing papers")
|
|
|
|
| 319 |
print(f"Mode: {'dry-run' if args.dry_run else 'apply'}")
|
| 320 |
print("-" * 50)
|
| 321 |
|
| 322 |
+
candidates, candidate_stats = iter_candidates(session, args.limit)
|
|
|
|
| 323 |
if candidates:
|
| 324 |
first_added_at = (
|
| 325 |
candidates[0].added_at.isoformat() if candidates[0].added_at else "unknown"
|
|
|
|
| 334 |
print("Candidates: 0")
|
| 335 |
print("-" * 50)
|
| 336 |
|
| 337 |
+
stats = {
|
| 338 |
+
"indexed": 0,
|
| 339 |
+
"already_indexed": 0,
|
| 340 |
+
"links": 0,
|
| 341 |
+
"dry_run": 0,
|
| 342 |
+
"index_errors": 0,
|
| 343 |
+
"link_errors": 0,
|
| 344 |
+
}
|
| 345 |
|
| 346 |
for candidate in candidates:
|
| 347 |
pieces = [
|
|
|
|
| 371 |
stats["already_indexed"] += 1
|
| 372 |
print(f"ALREADY INDEXED: {' | '.join(pieces)}")
|
| 373 |
else:
|
| 374 |
+
stats["index_errors"] += 1
|
| 375 |
print(
|
| 376 |
f"ERROR: {candidate.arxiv_id} - failed to index"
|
| 377 |
f" (status={index_http_status}, error={index_error})"
|
|
|
|
| 388 |
stats["links"] += 1
|
| 389 |
print(f"LINKS {links_status.upper()}: {candidate.arxiv_id}")
|
| 390 |
else:
|
| 391 |
+
stats["link_errors"] += 1
|
| 392 |
print(
|
| 393 |
f"ERROR: {candidate.arxiv_id} - failed to update links"
|
| 394 |
f" (status={links_http_status}, error={links_error})"
|
| 395 |
)
|
| 396 |
|
| 397 |
print("-" * 50)
|
| 398 |
+
print(f"Link-bearing rows checked: {candidate_stats.link_rows_checked}")
|
| 399 |
+
print(f"Already indexed while selecting: {candidate_stats.already_indexed}")
|
| 400 |
+
print(f"Status check errors: {candidate_stats.status_errors}")
|
| 401 |
print(f"Candidates: {len(candidates)}")
|
| 402 |
print(f"Indexed: {stats['indexed']}")
|
| 403 |
print(f"Already indexed: {stats['already_indexed']}")
|
| 404 |
print(f"Links updated: {stats['links']}")
|
| 405 |
print(f"Dry run: {stats['dry_run']}")
|
| 406 |
+
print(f"Index errors: {stats['index_errors']}")
|
| 407 |
+
print(f"Link errors: {stats['link_errors']}")
|
| 408 |
|
| 409 |
+
if stats["index_errors"] or candidate_stats.status_errors:
|
| 410 |
exit(1)
|
| 411 |
|
| 412 |
|