Add library name and link to paper page

#1
by nielsr HF Staff - opened
Files changed (1) hide show
  1. README.md +21 -8
README.md CHANGED
@@ -1,10 +1,11 @@
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  ---
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- license: apache-2.0
 
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  language:
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  - en
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- base_model:
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- - FreedomIntelligence/HuatuoGPT-o1-8B
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  pipeline_tag: text-generation
 
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  tags:
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  - medical
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  - medical-reasoning
@@ -20,7 +21,7 @@ tags:
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  </div>
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  <div align="center">
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- <a href="https://github.com/TianYin123/Med-REFL" target="_blank">GitHub</a> | <a href="https://arxiv.org/abs/2504.12334" target="_blank">Paper</a>
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  </div>
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  # <span>Introduction</span>
@@ -38,7 +39,7 @@ The Med-REFL LoRA weights can be applied to the following base models to enhance
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  | :--- | :--- | :--- |
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  | **Med-REFL for Llama-3.1-8B** | Llama-3.1-8B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-Llama-3.1-8B-lora) |
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  | **Med-REFL for Qwen2.5-7B** | Qwen2.5-7B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-Qwen2.5-7B-lora) |
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- | **Med-REFL for Huatuo-o1-8B** | Huatuo-o1-8b | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-Huatuo-o1-8B-lora) |
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  | **Med-REFL for MedReason-8B**| MedReason-8B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-MedReason-8B-lora) |
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  # <span>Usage</span>
@@ -67,8 +68,17 @@ base_model = AutoModelForCausalLM.from_pretrained(
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  model = PeftModel.from_pretrained(base_model, lora_path)
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  # Prepare the prompt
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- system_prompt = '''You are a helpful medical expert specializing in USMLE exam questions, and your task is to answer a multi-choice medical question. Please first think step-by-step and then choose the answer from the provided options. Your responses will be used for research purposes only, so please have a definite answer.\nProvide your response in the following JSON format:\n{"reason": "Step-by-step explanation of your thought process","answer": "Chosen answer from the given options"}\n'''
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- user_prompt = "A 67-year-old man with transitional cell carcinoma of the bladder comes to the physician because of a 2-day history of ringing sensation in his ear. He received this first course of neoadjuvant chemotherapy 1 week ago. Pure tone audiometry shows a sensorineural hearing loss of 45 dB. The expected beneficial effect of the drug that caused this patient's symptoms is most likely due to which of the following actions?\nOptions:\nA: Inhibition of thymidine synthesis\nB: Inhibition of proteasome\nC: Hyperstabilization of microtubules\nD: Generation of free radicals\nE: Cross-linking of DNA"
 
 
 
 
 
 
 
 
 
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  messages = [
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  {"role": "system", "content": system_prompt},
@@ -102,4 +112,7 @@ print(tokenizer.decode(response, skip_special_tokens=True))
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  If you use these weights or the Med-REFL framework in your research, please cite our paper:
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  ```
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- ```
 
 
 
 
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  ---
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+ base_model:
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+ - FreedomIntelligence/HuatuoGPT-o1-8B
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  language:
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  - en
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+ license: apache-2.0
 
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  pipeline_tag: text-generation
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+ library_name: transformers
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  tags:
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  - medical
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  - medical-reasoning
 
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  </div>
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  <div align="center">
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+ <a href="https://github.com/TianYin123/Med-REFL" target="_blank">GitHub</a> | <a href="https://huggingface.co/papers/2506.13793" target="_blank">Paper</a>
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  </div>
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  # <span>Introduction</span>
 
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  | :--- | :--- | :--- |
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  | **Med-REFL for Llama-3.1-8B** | Llama-3.1-8B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-Llama-3.1-8B-lora) |
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  | **Med-REFL for Qwen2.5-7B** | Qwen2.5-7B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-Qwen2.5-7B-lora) |
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+ | **Med-REFL for Huatuo-o1-8B** | Huatuo-o1-8B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-Huatuo-o1-8B-lora) |
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  | **Med-REFL for MedReason-8B**| MedReason-8B | [HF Link](https://huggingface.co/HANI-LAB/Med-REFL-MedReason-8B-lora) |
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  # <span>Usage</span>
 
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  model = PeftModel.from_pretrained(base_model, lora_path)
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  # Prepare the prompt
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+ system_prompt = '''You are a helpful medical expert specializing in USMLE exam questions, and your task is to answer a multi-choice medical question. Please first think step-by-step and then choose the answer from the provided options. Your responses will be used for research purposes only, so please have a definite answer.
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+ Provide your response in the following JSON format:
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+ {"reason": "Step-by-step explanation of your thought process","answer": "Chosen answer from the given options"}
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+ '''
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+ user_prompt = "A 67-year-old man with transitional cell carcinoma of the bladder comes to the physician because of a 2-day history of ringing sensation in his ear. He received this first course of neoadjuvant chemotherapy 1 week ago. Pure tone audiometry shows a sensorineural hearing loss of 45 dB. The expected beneficial effect of the drug that caused this patient's symptoms is most likely due to which of the following actions?
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+ Options:
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+ A: Inhibition of thymidine synthesis
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+ B: Inhibition of proteasome
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+ C: Hyperstabilization of microtubules
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+ D: Generation of free radicals
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+ E: Cross-linking of DNA"
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  messages = [
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  {"role": "system", "content": system_prompt},
 
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  If you use these weights or the Med-REFL framework in your research, please cite our paper:
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  ```
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+ ```
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+ ## Star History
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+
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+ [![Star History Chart](https://api.star-history.com/svg?repos=TianYin123/Med-REFL&type=Date)](https://www.star-history.com/#TianYin123/Med-REFL&Date)