GPN-Star
Collection
paper: https://www.biorxiv.org/content/10.1101/2025.09.21.677619v1 code: https://github.com/songlab-cal/gpn
•
30 items
•
Updated
•
5
chrom
stringclasses 32
values | pos
int64 313
198M
| ref
stringclasses 4
values | alt
stringclasses 4
values | AF
float64 0
1
| consequence
stringclasses 13
values | label
bool 2
classes |
|---|---|---|---|---|---|---|
1
| 17,263
|
T
|
G
| 0.001
|
intergenic
| true
|
1
| 24,308
|
A
|
T
| 0.497
|
non_coding_transcript_exon
| false
|
1
| 28,598
|
T
|
A
| 0.001
|
intron
| true
|
1
| 32,238
|
T
|
G
| 0.001
|
missense
| true
|
1
| 33,689
|
T
|
C
| 0.001
|
downstream_gene
| true
|
1
| 33,707
|
G
|
A
| 0.001
|
downstream_gene
| true
|
1
| 33,745
|
A
|
G
| 0.001
|
downstream_gene
| true
|
1
| 33,817
|
G
|
A
| 0.001
|
downstream_gene
| true
|
1
| 36,368
|
C
|
T
| 0.001
|
intergenic
| true
|
1
| 36,742
|
T
|
C
| 0.001
|
intergenic
| true
|
1
| 37,100
|
G
|
T
| 0.278
|
intergenic
| false
|
1
| 37,269
|
A
|
C
| 0.001
|
intergenic
| true
|
1
| 37,277
|
C
|
T
| 0.001
|
intergenic
| true
|
1
| 37,346
|
A
|
G
| 0.23
|
intergenic
| false
|
1
| 37,559
|
C
|
T
| 0.001
|
intergenic
| true
|
1
| 37,703
|
C
|
T
| 0.001
|
intergenic
| true
|
1
| 38,428
|
G
|
A
| 0.001
|
downstream_gene
| true
|
1
| 39,025
|
C
|
T
| 0.001
|
downstream_gene
| true
|
1
| 39,228
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 39,562
|
C
|
G
| 0.214
|
3_prime_UTR
| false
|
1
| 42,948
|
A
|
G
| 0.369
|
upstream_gene
| false
|
1
| 42,995
|
C
|
A
| 0.381
|
upstream_gene
| false
|
1
| 53,958
|
C
|
A
| 0.001
|
intron
| true
|
1
| 62,400
|
A
|
G
| 0.001
|
upstream_gene
| true
|
1
| 67,318
|
C
|
T
| 0.001
|
downstream_gene
| true
|
1
| 67,428
|
C
|
T
| 0.001
|
downstream_gene
| true
|
1
| 67,445
|
A
|
G
| 0.001
|
downstream_gene
| true
|
1
| 67,515
|
T
|
G
| 0.001
|
downstream_gene
| true
|
1
| 67,517
|
A
|
C
| 0.001
|
downstream_gene
| true
|
1
| 67,731
|
G
|
A
| 0.001
|
downstream_gene
| true
|
1
| 68,051
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 68,178
|
C
|
T
| 0.001
|
3_prime_UTR
| true
|
1
| 68,559
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 68,605
|
C
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 68,648
|
C
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 72,449
|
A
|
C
| 0.001
|
intron
| true
|
1
| 72,546
|
C
|
A
| 0.001
|
intron
| true
|
1
| 73,722
|
G
|
A
| 0.001
|
intron
| true
|
1
| 73,880
|
C
|
T
| 0.001
|
intron
| true
|
1
| 74,110
|
G
|
A
| 0.396
|
intron
| false
|
1
| 74,248
|
C
|
G
| 0.001
|
intron
| true
|
1
| 74,273
|
C
|
A
| 0.001
|
intron
| true
|
1
| 74,529
|
C
|
T
| 0.001
|
intron
| true
|
1
| 74,875
|
T
|
C
| 0.001
|
intron
| true
|
1
| 74,932
|
G
|
A
| 0.001
|
intron
| true
|
1
| 76,910
|
C
|
T
| 0.001
|
intron
| true
|
1
| 76,945
|
G
|
A
| 0.001
|
intron
| true
|
1
| 76,957
|
T
|
C
| 0.001
|
intron
| true
|
1
| 77,276
|
C
|
T
| 0.001
|
missense
| true
|
1
| 77,310
|
G
|
A
| 0.001
|
synonymous
| true
|
1
| 78,061
|
G
|
A
| 0.001
|
intron
| true
|
1
| 78,453
|
G
|
A
| 0.001
|
synonymous
| true
|
1
| 79,078
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 79,501
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 79,611
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 80,567
|
G
|
A
| 0.001
|
intron
| true
|
1
| 80,737
|
G
|
C
| 0.001
|
intron
| true
|
1
| 81,034
|
G
|
T
| 0.001
|
missense
| true
|
1
| 81,036
|
C
|
T
| 0.001
|
missense
| true
|
1
| 81,543
|
T
|
C
| 0.001
|
5_prime_UTR
| true
|
1
| 81,634
|
C
|
T
| 0.001
|
5_prime_UTR
| true
|
1
| 82,049
|
A
|
C
| 0.001
|
missense
| true
|
1
| 82,195
|
G
|
A
| 0.001
|
synonymous
| true
|
1
| 82,425
|
C
|
T
| 0.001
|
3_prime_UTR
| true
|
1
| 82,656
|
C
|
T
| 0.001
|
3_prime_UTR
| true
|
1
| 82,790
|
C
|
T
| 0.001
|
3_prime_UTR
| true
|
1
| 83,254
|
C
|
A
| 0.396
|
synonymous
| false
|
1
| 84,810
|
C
|
T
| 0.001
|
downstream_gene
| true
|
1
| 84,811
|
G
|
A
| 0.001
|
downstream_gene
| true
|
1
| 85,141
|
C
|
G
| 0.001
|
intergenic
| true
|
1
| 85,246
|
A
|
G
| 0.001
|
intergenic
| true
|
1
| 85,307
|
C
|
T
| 0.001
|
intergenic
| true
|
1
| 85,724
|
A
|
G
| 0.001
|
intergenic
| true
|
1
| 87,318
|
A
|
G
| 0.001
|
intergenic
| true
|
1
| 87,364
|
A
|
G
| 0.001
|
intergenic
| true
|
1
| 87,423
|
C
|
T
| 0.001
|
intergenic
| true
|
1
| 87,435
|
T
|
A
| 0.001
|
intergenic
| true
|
1
| 87,674
|
G
|
A
| 0.001
|
intergenic
| true
|
1
| 88,090
|
A
|
G
| 0.001
|
intergenic
| true
|
1
| 88,319
|
A
|
T
| 0.001
|
intergenic
| true
|
1
| 88,384
|
G
|
A
| 0.001
|
intergenic
| true
|
1
| 88,705
|
G
|
A
| 0.001
|
intergenic
| true
|
1
| 88,715
|
A
|
C
| 0.001
|
intergenic
| true
|
1
| 91,012
|
C
|
T
| 0.001
|
intron
| true
|
1
| 91,049
|
A
|
G
| 0.001
|
intron
| true
|
1
| 91,732
|
G
|
C
| 0.001
|
missense
| true
|
1
| 91,786
|
C
|
A
| 0.001
|
splice_region
| true
|
1
| 92,671
|
C
|
T
| 0.001
|
synonymous
| true
|
1
| 92,831
|
G
|
A
| 0.001
|
intron
| true
|
1
| 93,676
|
C
|
T
| 0.001
|
3_prime_UTR
| true
|
1
| 93,690
|
C
|
T
| 0.001
|
3_prime_UTR
| true
|
1
| 93,882
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 94,177
|
C
|
T
| 0.297
|
3_prime_UTR
| false
|
1
| 94,248
|
G
|
A
| 0.001
|
3_prime_UTR
| true
|
1
| 94,384
|
A
|
C
| 0.001
|
3_prime_UTR
| true
|
1
| 94,520
|
A
|
G
| 0.001
|
3_prime_UTR
| true
|
1
| 94,556
|
A
|
G
| 0.001
|
3_prime_UTR
| true
|
1
| 95,085
|
A
|
G
| 0.001
|
downstream_gene
| true
|
1
| 96,453
|
A
|
C
| 0.001
|
intergenic
| true
|
1
| 96,788
|
A
|
C
| 0.001
|
intergenic
| true
|
End of preview. Expand
in Data Studio
README.md exists but content is empty.
- Downloads last month
- 24
Size of downloaded dataset files:
57.7 MB
Size of the auto-converted Parquet files:
57.7 MB
Number of rows:
9,489,601