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nf-core
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magmap

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magmap / testdata

9.57 GB

13 contributors

History: 24 commits

edmundmiller's picture

Add Megatests Data

5a526c6 unverified over 1 year ago

mega
Add Megatests Data over 1 year ago
GCA_002688505.1_ASM268850v1_genomic.fna.gz

69.6 kB

Minimum test data for magmap over 4 years ago
GCA_002688505.1_ASM268850v1_genomic.gff.gz

89.3 kB

Minimum test data for magmap over 4 years ago
GCF_004296495.1_ASM429649v1_genomic.fna.gz

51.7 kB

Minimum test data for magmap over 4 years ago
GCF_004296495.1_ASM429649v1_genomic.gff.gz

65.2 kB

Minimum test data for magmap over 4 years ago
ar53_metadata.tsv

4.8 kB

Adding test GTDB metadata almost 2 years ago
assembly_summary_genbank.txt

1.83 kB

Remove spaces almost 2 years ago
assembly_summary_refseq.txt

3.16 kB

Add refseq entry almost 2 years ago
bac120_metadata.tsv

13.6 kB

Adding duplicate to GTDB metadata almost 2 years ago
checkm.lineage_wf.qa_2.tsv

705 Bytes

Adding CheckM data almost 2 years ago
checkm2.quality_report.tsv

416 Bytes

Adding output from CheckM2 almost 2 years ago
genometest.csv

252 Bytes

new test-case almost 2 years ago
gtdbtk.ar122.summary.tsv

389 Bytes

CheckM and GTDBtk data about 4 years ago
gtdbtk.bac120.summary.tsv

2.51 kB

Adding GTDB test tsv almost 2 years ago
ncbi_accessions.tsv

32 Bytes

Test data with NCBI accessions about 4 years ago
ncbi_assembly_summaries.txt

179 Bytes

Adding smaller NCBI files almost 2 years ago
rrna.fna.gz

1.12 kB

Adding rrna file about 4 years ago
s0_1.fastq.gz

15.1 kB
xet

Increased quality scores over 4 years ago
s0_2.fastq.gz

15.1 kB
xet

Increased quality scores over 4 years ago
s1_1.fastq.gz

15 kB
xet

Increased quality scores over 4 years ago
s1_2.fastq.gz

15.1 kB
xet

Increased quality scores over 4 years ago
s2_1.fastq.gz

29.9 kB
xet

s2 reads were not paired about 4 years ago
s2_2.fastq.gz

29.9 kB
xet

s2 reads were not paired about 4 years ago
sourmash_k21.index.sbt.zip
Pickle imports
- No problematic imports detected
What is a pickle import?
67.6 kB

Move the index almost 2 years ago
sourmash_test.index.sbt.zip
Pickle imports
- No problematic imports detected
What is a pickle import?
75.6 kB

new test almost 2 years ago