BRENDA Tissue Ontology (BTO) ======================================================================================================================== Overview -------- A structured controlled vocabulary for the source of an enzyme comprising tissues, cell lines, cell types and cell cultures. :Domain: Medicine :Category: Enzyme :Current Version: 2021-10-26 :Last Updated: 2021-10-26 :Creator: None :License: Creative Commons 4.0 :Format: OWL :Download: `BRENDA Tissue Ontology (BTO) Homepage `_ Graph Metrics ------------- - **Total Nodes**: 37130 - **Total Edges**: 86188 - **Root Nodes**: 5619 - **Leaf Nodes**: 21886 Knowledge coverage ------------------ - Classes: 6569 - Individuals: 0 - Properties: 10 Hierarchical metrics -------------------- - **Maximum Depth**: 7 - **Minimum Depth**: 0 - **Average Depth**: 1.37 - **Depth Variance**: 0.68 Breadth metrics ------------------ - **Maximum Breadth**: 16002 - **Minimum Breadth**: 9 - **Average Breadth**: 4411.62 - **Breadth Variance**: 36150459.73 Dataset Statistics ------------------ Generated Benchmarks: - **Term Types**: 0 - **Taxonomic Relations**: 5888 - **Non-taxonomic Relations**: 0 - **Average Terms per Type**: 0.00 Usage Example ------------- .. code-block:: python from ontolearner.ontology import BTO # Initialize and load ontology ontology = BTO() ontology.load("path/to/ontology.OWL") # Extract datasets data = ontology.extract() # Access specific relations term_types = data.term_typings taxonomic_relations = data.type_taxonomies non_taxonomic_relations = data.type_non_taxonomic_relations